Publications
Highlighted
Clinical and Epidemiological Aspects of Diphtheria: A Systematic Review and Pooled Analysis.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
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24 Jun 2020
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pmid:31425581
All
2024
The Effectiveness of Face Mask Mandates on COVID-19 Transmission in Utah
Public Health Reports®
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30 Oct 2024
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doi:10.1177/00333549241290676
A theoretical framework to quantify the tradeoff between individual and population benefits of expanded antibiotic use
Cold Spring Harbor Laboratory
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28 Aug 2024
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doi:10.1101/2024.08.28.24312731
Importance of underlying mechanisms for interpreting relative risk of Clostridioides difficile infection among antibiotic-exposed patients in healthcare facilities
PLOS ONE
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08 Aug 2024
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doi:10.1371/journal.pone.0306622
Model-based estimates of age-structured SARS-CoV-2 epidemiology in households
Cold Spring Harbor Laboratory
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19 Apr 2024
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doi:10.1101/2024.04.18.24306047
2023
Assessing the Impact of Mask Mandates on SARS-CoV-2 Transmission: A Case Study of Utah
Cold Spring Harbor Laboratory
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13 Nov 2023
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doi:10.1101/2023.11.13.23298464
2022
432. Ward-level Variation in Transmission of MRSA in Veterans Affairs Hospitals
Open Forum Infectious Diseases
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01 Dec 2022
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doi:10.1093/ofid/ofac492.507
AreStaphylococcus aureusCarrier Types Evidence of Population Heterogeneity?
American Journal of Epidemiology
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17 Nov 2022
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doi:10.1093/aje/kwac201
Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States.
Proceedings of the National Academy of Sciences of the United States of America
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08 Apr 2022
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pmid:35394862
2021
Analysis of Vaccine Effectiveness Against COVID-19 and the Emergence of Delta and Other Variants of Concern in Utah
JAMA Network Open
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23 Dec 2021
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doi:10.1001/jamanetworkopen.2021.40906
High variability in transmission of SARS-CoV-2 within households and implications for control
PLOS ONE
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10 Nov 2021
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doi:10.1371/journal.pone.0259097
The United States COVID-19 Forecast Hub dataset
Cold Spring Harbor Laboratory
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04 Nov 2021
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doi:10.1101/2021.11.04.21265886
Comparison of antigen- and RT-PCR-based testing strategies for detection of SARS-CoV-2 in two high-exposure settings.
PloS one
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07 Sep 2021
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pmid:34492025
Comparison of antigen- and RT-PCR-based testing strategies for detection of Sars-Cov-2 in two high-exposure settings
Cold Spring Harbor Laboratory
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06 Jun 2021
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doi:10.1101/2021.06.03.21258248
Modeling transmission of pathogens in healthcare settings
Current Opinion in Infectious Diseases
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25 May 2021
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doi:10.1097/QCO.0000000000000742
Modeling of Future COVID-19 Cases, Hospitalizations, and Deaths, by Vaccination Rates and Nonpharmaceutical Intervention Scenarios — United States, April–September 2021
MMWR. Morbidity and Mortality Weekly Report
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14 May 2021
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doi:10.15585/mmwr.mm7019e3
Coordinated Strategy for a Model-Based Decision Support Tool for Coronavirus Disease, Utah, USA.
Emerging infectious diseases
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01 May 2021
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pmid:33900179
Coordinated Strategy for a Model-Based Decision Support Tool for Coronavirus Disease, Utah, USA
Emerging Infectious Diseases
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01 May 2021
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doi:10.3201/eid2705.203075
A scenario modeling pipeline for COVID-19 emergency planning.
Scientific reports
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06 Apr 2021
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pmid:33824358
A scenario modeling pipeline for COVID-19 emergency planning
Scientific Reports
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06 Apr 2021
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doi:10.1038/s41598-021-86811-0
Association Between Contact Precautions and Transmission of Methicillin-Resistant Staphylococcus aureus in Veterans Affairs Hospitals
JAMA Network Open
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15 Mar 2021
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doi:10.1001/jamanetworkopen.2021.0971
The Effects of Using a Clinical Prediction Rule to Prioritize Diagnostic Testing on Transmission and Hospital Burden: A Modeling Example of Early Severe Acute Respiratory Syndrome Coronavirus 2
Clinical Infectious Diseases
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23 Feb 2021
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doi:10.1093/cid/ciab177
Evaluation of individual and ensemble probabilistic forecasts of COVID-19
mortality in the US
Cold Spring Harbor Laboratory
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05 Feb 2021
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doi:10.1101/2021.02.03.21250974
Robust Testing in Outpatient Settings to Explore COVID-19 Epidemiology: Disparities in Race/Ethnicity and Age, Salt Lake County, Utah, 2020
Public Health Reports®
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04 Feb 2021
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doi:10.1177/0033354920988612
Transmission Dynamics of Clostridioides difficile in 2 High-Acuity Hospital Units
Clinical Infectious Diseases
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15 Jan 2021
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doi:10.1093/cid/ciaa1580
Effectiveness of Contact Precautions to Prevent Transmission of Methicillin-Resistant Staphylococcus aureus and Vancomycin-Resistant Enterococci in Intensive Care Units
Clinical Infectious Diseases
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15 Jan 2021
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doi:10.1093/cid/ciaa1603
Continued need for non-pharmaceutical interventions after COVID-19 vaccination in long-term-care facilities
Cold Spring Harbor Laboratory
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06 Jan 2021
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doi:10.1101/2021.01.06.21249339
2020
Seasonal patterns of dengue incidence in Thailand across the urban-rural gradient
Cold Spring Harbor Laboratory
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27 Nov 2020
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doi:10.1101/2020.11.25.20186056
A modular approach to integrating multiple data sources into real-time clinical prediction for pediatric diarrhea
Cold Spring Harbor Laboratory
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27 Oct 2020
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doi:10.1101/2020.10.26.20210385
Ensemble Forecasts of Coronavirus Disease 2019 (COVID-19) in the U.S.
Cold Spring Harbor Laboratory
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22 Aug 2020
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doi:10.1101/2020.08.19.20177493
Modeling the potential impact of administering vaccines against Clostridioides difficile infection to individuals in healthcare facilities
Vaccine
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01 Aug 2020
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doi:10.1016/j.vaccine.2020.06.081
Modeling reductions in SARS-CoV-2 transmission and hospital burden achieved by prioritizing testing using a clinical prediction rule
Cold Spring Harbor Laboratory
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08 Jul 2020
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doi:10.1101/2020.07.07.20148510
Clinical and Epidemiological Aspects of Diphtheria: A Systematic Review and Pooled Analysis.
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America
·
24 Jun 2020
·
pmid:31425581
Planning for the aftershocks: a model of post-acute care needs for hospitalized COVID-19 patients
Cold Spring Harbor Laboratory
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13 Jun 2020
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doi:10.1101/2020.06.12.20129551
The real time effective reproductive number for COVID-19 in the United States
Cold Spring Harbor Laboratory
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13 May 2020
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doi:10.1101/2020.05.08.20095703
2019
Clinical and Epidemiological Aspects of Diphtheria: A Systematic Review and Pooled Analysis
Clinical Infectious Diseases
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19 Aug 2019
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doi:10.1093/cid/ciz808
2018
Perfect Counterfactuals for Epidemic Simulations
Cold Spring Harbor Laboratory
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26 Oct 2018
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doi:10.1101/451153
Prospective forecasts of annual dengue hemorrhagic fever incidence in Thailand, 2010–2014
Proceedings of the National Academy of Sciences
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20 Feb 2018
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doi:10.1073/pnas.1714457115
2017
Quantifying Zika: Advancing the Epidemiology of Zika With Quantitative Models
The Journal of Infectious Diseases
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15 Dec 2017
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doi:10.1093/infdis/jix437
2016
Estimating finite-population reproductive numbers in heterogeneous populations
Journal of Theoretical Biology
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01 May 2016
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doi:10.1016/j.jtbi.2016.01.022
2014
Analytic Calculation of Finite-Population Reproductive Numbers for Direct- and Vector-Transmitted Diseases with Homogeneous Mixing
Bulletin of Mathematical Biology
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23 Apr 2014
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doi:10.1007/s11538-014-9950-x
2013
Population-level effects of clinical immunity to malaria
BMC Infectious Diseases
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11 Sep 2013
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doi:10.1186/1471-2334-13-428